{
  "_id": "6a197e93acfb0bcc41df7a78",
  "Package": "SweepDiscovery",
  "Type": "Package",
  "Title": "Selective Sweep Discovery Tool",
  "Version": "0.1.1",
  "Authors@R": "c(person(\"Abhik \", \"Sarkar\", role = c(\"aut\",\"cre\"), email = \"abhik.jenkins.sarkar@gmail.com\"),\nperson(\"Dwijesh Chandra\", \"Mishra\", role = \"aut\", email = \"dwij.mishra@gmail.com\"),\nperson(\" Dipro\", \"Sinha\", role = \"aut\", email = \"diprosinha@gmail.com\"),\nperson(\"Saikath\", \"Das\", role = \"aut\", email = \"saikathdas007@gmail.com\"),\nperson(\"Md\", \"Yeasin\", role = \"aut\", email = \"yeasin.iasri@gmail.com\"))",
  "Author": "Abhik Sarkar [aut, cre], Dwijesh Chandra Mishra [aut], Dipro\nSinha [aut], Saikath Das [aut], Md Yeasin [aut]",
  "Maintainer": "Abhik Sarkar <abhik.jenkins.sarkar@gmail.com>",
  "Description": "Selective sweep is a biological phenomenon in which\ngenetic variation between neighboring beneficial mutant alleles\nis swept away due to the effect of genetic hitchhiking.\nDetection of selective sweep is not well acquainted as well as\nit is a laborious job. This package is a user friendly approach\nfor detecting selective sweep in genomic regions. It uses a\nRandom Forest based machine learning approach to predict\nselective sweep from VCF files as an input. Input of this\nfunction, train data and new data, can be computed using the\nproject <https://github.com/AbhikSarkar1999/SweepDiscovery> in\n'GitHub'. This package has been developed by using the concept\nof Pavlidis and Alachiotis (2017)\n<doi:10.1186/s40709-017-0064-0>.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.2.1",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-29 11:24:07 UTC",
    "User": "root"
  },
  "Repository": "https://abhiksarkar1999.r-universe.dev",
  "Date/Publication": "2023-12-15 02:39:17 UTC",
  "RemoteUrl": "https://github.com/cran/SweepDiscovery",
  "RemoteRef": "HEAD",
  "RemoteSha": "53b1c2345da09ab2109704917688c7263d8e89d5",
  "MD5sum": "a87933ac84e89554df776dbcb3ef620b",
  "_user": "abhiksarkar1999",
  "_type": "src",
  "_file": "SweepDiscovery_0.1.1.tar.gz",
  "_fileid": "3c6e637fc18d3f7ad7dadcfd6418d51d7ad548ea850428dbefd8c5e67ac97893",
  "_filesize": 1745881,
  "_sha256": "3c6e637fc18d3f7ad7dadcfd6418d51d7ad548ea850428dbefd8c5e67ac97893",
  "_created": "2026-05-29T11:24:07.000Z",
  "_published": "2026-05-29T11:54:59.494Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78491235732,
      "time": 99,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7289548625"
    },
    {
      "job": 78491235743,
      "time": 96,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7289547940"
    },
    {
      "job": 78491235723,
      "time": 132,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7290027405"
    },
    {
      "job": 78491235756,
      "time": 154,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7290030822"
    },
    {
      "job": 78490942384,
      "time": 122,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7289519119"
    },
    {
      "job": 78491235751,
      "time": 89,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7289545917"
    },
    {
      "job": 78491235728,
      "time": 72,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7289540807"
    },
    {
      "job": 78491235707,
      "time": 59,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7289537202"
    },
    {
      "job": 78491235795,
      "time": 66,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7289539242"
    }
  ],
  "_buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/SweepDiscovery",
  "_commit": {
    "id": "53b1c2345da09ab2109704917688c7263d8e89d5",
    "author": "Abhik Sarkar <abhik.jenkins.sarkar@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.1\n",
    "time": 1702607957
  },
  "_maintainer": {
    "name": "Abhik Sarkar",
    "email": "abhik.jenkins.sarkar@gmail.com",
    "login": "abhiksarkar1999",
    "description": "",
    "uuid": 152661879
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "randomForest",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "abhiksarkar1999",
      "count": 1,
      "uuid": 152661879
    }
  ],
  "_userbio": {
    "uuid": 152661879,
    "type": "user",
    "name": "AbhikSarkar1999"
  },
  "_downloads": {
    "count": 135,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/SweepDiscovery"
  },
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/SweepDiscovery.html",
    "manual.pdf"
  ],
  "_realowner": "abhiksarkar1999",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2023-12-14"
    }
  ],
  "_exports": [
    "SweepPrediction"
  ],
  "_help": [
    {
      "page": "SweepPrediction",
      "title": "SweepPrediction",
      "topics": [
        "SweepPrediction"
      ]
    }
  ],
  "_rundeps": [
    "randomForest"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "sweepdiscovery",
  "_universes": [
    "abhiksarkar1999"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-29T11:25:51.000Z",
      "distro": "noble",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "a575ba1bdec533ee739a548a4bccb789ee5f52c9f28f50f45fe73093159b9ea4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-29T11:25:50.000Z",
      "distro": "noble",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "48c3e7003e78bed6b285f3990077e3b357df582a42097d2cb8a627296f80764e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-29T11:53:55.000Z",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "041be28d825aa8a484b62a3dac6ecf7b1240b43d7dc4ef872c58bcf0caf0a20f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-29T11:54:06.000Z",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "eb0427ad3087ca9744a246da5f6cb9b3a25970183db93182baf5959c2cf29890",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-05-29T11:25:51.000Z",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "4788f753f0b7f8c74bd0f8538f2c78df7104bbf38a695a2b02f44b37acef5a08",
      "status": "success",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-29T11:25:22.000Z",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "1974f1d7de366c7cbfca6e544d09ffbee08b3b6161a9fcddfb0a7b8e47cbc75d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-29T11:25:11.000Z",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "afe1089d17e2e10a8af45d839f0dc2a5d166e19f50ccf31b4b33de0e5579758b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-29T11:25:17.000Z",
      "commit": "53b1c2345da09ab2109704917688c7263d8e89d5",
      "fileid": "0470ff255cea4cf2297d8283e8ec01ca7efb8e0a30646c36163d84af58c3eeb3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/abhiksarkar1999/actions/runs/26634391424"
    }
  ]
}